http://www.barblog.co.uk/4a5s6x7q8w9h0jf1d2e3r.php
The name o'f peace is sweet, and the thing itself is beneficial, but there is a
great difference between peace and servitude.Alyssia Kubisiak--
Dear all,
After simulation of my protein I have aligned the initial and the final
structure and I could see movement in one domain, now to measure the angle
between the domain I used the following lines,
Select d1, Structure1 and resi 1-160
Select d2, Structure2 and resi 1-160
angle_between_dom
Dear all,
I have aligned two structures (one the initial structure and another one is the
final structure after MD simulation) in pymol, now I want to measure the
C-alpha- C-alpha distances of each residue between the initial and the final
structure of the MD simulation. Is it possible to do it
