Re: [PyMOL] Anaconda python-bundle package documentation or help

2025-01-22 Thread Norbert Straeter
Dear Csongor, as far as I know it is not well documented how you can access the python objects and its methods or data structures created by the PyMOL API. For many tasks one usually finds some information, often PyMOL or python scripts. Concerning your example of the hydrogen bonds determine

Re: [PyMOL] Anaconda python-bundle package documentation or help

2025-01-22 Thread Tamas Hegedus
Dear Csongor, cmd select creates a named selection. if you do not use a name, the default name "sele" will be used. You see this if you use the gui version. Plus: https://pymol.org/dokuwiki/doku.php?id=api:cmd:select cmd.select("resi 150-160") cmd.color("red", "sele") cmd.select("myselection

[PyMOL] Anaconda python-bundle package documentation or help

2025-01-22 Thread Csongor MATYAS via PyMOL-users
Hey everyone, I am trying to use pymol from python to have some repetitive tasks done. I've managed to get some basic functions running but I'm running into walls frequently. I couldn't find a tutorial or documentation about this. Am I missing something? I know it's under development but I woul