Hi Wei -
Fun problem! Not a "smart" way to do it, but I think functional, using
pseudoatoms and orient to set the view angle:
```
# Create an origin pseudoatom
ori_coords = [0.4017522, 23.15367207, 6.68992345]
cmd.pseudoatom("ori", pos=ori_coords)
color red, ori
show nb_spheres, ori
# Second ps
Dear PyMOL community,
I have a need to adjust my view point in python script. I want to achieve the
following:
1. I have a origin with coordinates [ 0.4017522 23.15367207 6.68992345]
2. I have a vector/rotation axis [0.74, 0.18, -0.65]
3. I want to look directly down that vector using above orig
Hello Joel,
Actually I am using VINA that indeed provides us with these RMSD
values. However the goal is to compare the docking poses with the
X-ray structure containing another (but very similar in terms of the
functional groups) ligand.
I've already tried some pymol built-in commands like pair_fi
