Re: [PyMOL] Label charge sites, termini, check contrast

2021-02-01 Thread Jared Sampson
Sorry, I replied from my phone earlier...the correct setting is `label_position`. https://pymolwiki.org/index.php/Label_position Best, Jared On Sun, Jan 31, 2021 at 8:17 PM Jared Sampson wrote: > Hi Neena - > > There is also a `label_offset` setting, which can be given an x,y,z vector > in vie

Re: [PyMOL] Label charge sites, termini, check contrast

2021-02-01 Thread Jared Sampson
Hi Neena - There is also a `label_offset` setting, which can be given an x,y,z vector in viewport coordinates. So if you want all labels to be in the foreground compared to their respective atom(s), you might set it via: set label_offset, [0,0,5] I believe this can also be done in an object-spec

Re: [PyMOL] Mac Installation Question

2021-02-01 Thread Justine Williams
Dear Users, Thank you very much for the suggestions! I was able to connect to a computer remotely to try them out. In case anyone else has issues with this in the future: homebrew does indeed work nicely with open source PyMOL and Rdkit. It turns out there was an issue with the Python pathways