Re: [PyMOL] Holes in dots

Hi Jason -  This happens when there is an overlap with another atom's dots, for example where there is an H-bond or vdW contact.  One workaround would be to extract that residue you're showing in dots into a new object, so it doesn't have anything else in the object to interfere with it. Hope

[PyMOL] Holes in dots

Hi, I've been trying to figure out how to fix this and I just can't figure it out. I'm trying to make a nice render with dots and everything looks fine except for that the nitrogens and oxygens have these holes in them (see image: https://i.imgur.com/5G644br.png