Re: [PyMOL] How to hide dihedral angle labels in mdo animation using set_dihedral

2020-02-25 Thread Nanna Holmgaard List
Thank you very much Thomas! Best, Nanna Fra: Thomas Holder Sendt: 25. februar 2020 03:00 Til: Nanna Holmgaard List Cc: pymol-users@lists.sourceforge.net Emne: Re: [PyMOL] How to hide dihedral angle labels in mdo animation using set_dihedral Hi Nanna, These in

Re: [PyMOL] How to hide dihedral angle labels in mdo animation using set_dihedral

2020-02-25 Thread Thomas Holder
Hi Nanna, These indicators come from the various "pk" selections. The "unpick" command will remove them. Just call "unpick" right after "set_dihedral", like this: mdo 30: set_dihedral sele1, sele2, sele3, sele4, 123; unpick Hope that helps. Cheers, Thomas > On Feb 21, 2020, at 7:50 AM, Nann

Re: [PyMOL] Accessing vertex normals from surface representation within PyMOL session

2020-02-25 Thread Thomas Holder
Hi Jared, Apologies for the late reply. Unfortunately such an API doesn't exist. I agree that it would be very useful, I will file a feature request. Cheers, Thomas > On Feb 14, 2020, at 9:20 PM, Jared Sampson wrote: > > Hi all - > > Is it possible to access surface triangle mesh position

Re: [PyMOL] Pymol Rendering

2020-02-25 Thread Thomas Holder
Hi Seán, Enabling multi-layer transparency should do the trick. From the menu: Setting > Transparency > Multi-Layer From the command line: PyMOL> set transparency_mode, 1 Hope that helps. Cheers, Thomas > On Feb 24, 2020, at 10:32 PM, Seán Downey wrote: > > Hi all, > > I am trying to r