This worked! Thank you Leandro and Jed!
From: jedg...@gmail.com [mailto:jedg...@gmail.com] On Behalf Of Jed Goldstone
Sent: Tuesday, April 4, 2017 11:35
To: Vivien Schoonenberg
Cc: pymol-users@lists.sourceforge.net
Subject: Re: [PyMOL] (no subject)
Try using
remove not alt +A
to remove a
Try using
remove not alt +A
to remove alternative conformations.
Jed
On Mon, Apr 3, 2017 at 11:47 AM, Vivien Schoonenberg <
vivienschoonenb...@gmail.com> wrote:
> Hi there,
>
>
>
> I’m saving the sequences from each chain of the PDB via pymol with
>
> >>save something.fasta, chain A
>
>
>
> Th
Hi,
You probably have a pdb file which has multiple possible conformations
for some residues. You can check this by visual inspection of such
residues. They have two side chains coming from the same CA. In the text
file you can see the conformations marked as A and B in the residue name
field
