Re: [PyMOL] how to copy color?

2015-08-28 Thread Thomas Holder
Hi Albert, Such a property transfer can be done with iterate and alter: stored.colors = {} iterate obj1, stored.colors[chain,resi,name] = color alter obj2, color = stored.colors.get((chain,resi,name), color) recolor Hope that helps. Cheers, Thomas On 28 Aug 2015, at 10:03, Albert wrote: >

[PyMOL] how to copy color?

2015-08-28 Thread Albert
Hello: I've colored object1 in various color in different regions. I am just wondering how can we copy the color scheme for object1 to object2? Object 2 is the same protein with object1 but with different conformations. Thank you very much Albert --

Re: [PyMOL] new to pymol

2015-08-28 Thread Osvaldo Martin
Hi Celestine, Welcome to the PyMOL community! I am not sure what is your problem, could you please provide more details? Cheers, Osvaldo. On Fri, Aug 28, 2015 at 6:00 AM, Chi Celestine < chi.celest...@phys.chem.ethz.ch> wrote: > > Hi, > I am very new in pymol and will like to know how know

Re: [PyMOL] creation of a sphere

2015-08-28 Thread David Hall
What version of PyMol are you using? > On Aug 27, 2015, at 7:50 AM, Christian Trindler > wrote: > > Hello, > > I’ve been trying to make a pseudoatom/sphere simply by typing: > pseudoatom name > into the command line of Pymol, but it only gives me the following error > message instead of the

[PyMOL] creation of a sphere

2015-08-28 Thread Christian Trindler
Hello, I've been trying to make a pseudoatom/sphere simply by typing: pseudoatom name into the command line of Pymol, but it only gives me the following error message instead of the pseudoatom: Traceback (most recent call last): File "C:\Program Files (x86)\DeLano Scientific\PyMOL/modules\pym

[PyMOL] new to pymol

2015-08-28 Thread Chi Celestine
Hi, I am very new in pymol and will like to know how know the display in the lower command line works. However, i can see how to make it active. I have pymol v1.7.6.4 Thanks Celestine -- ___