Re: [PyMOL] Fuse command

Hi Mark, As indicated in the wiki the fuse command takes two selections as arguments. “Each selection must include a single atom in each object. The atoms can both be hydrogens, in which case they are eliminated, or they can both be non-hydrogens, in which

[PyMOL] Fuse command

Hi, Using the protein builder I've created 14 separate objects consisting of 7 transmembrane (TM) helices and alternating extracellular (EL) and intracellular (IL) loop structures. I would like to combine these separate objects so that I have a straight polypeptide chain. In other words, I woul

Re: [PyMOL] How to build imedazole by using builder

Hi Surya, I don't know exactly what problem are you experiencing (I tried to do something similar without any problem). I guess that maybe the problem is that when you are rebuilding the ring, you are positioning the atoms in a not very good position and maybe PyMOL is having trouble to figure-out

[PyMOL] How to build imedazole by using builder

Dear pymol users I have been trying to build imidazol ring to one incomplete His of my pdb file by using builder in pymol. After finishing this ring I saved and opened once again by pymol. I have seen some thing like mess formation with in the residues. I request you to tell me what could be the r