Hi Cedric,
Check out the "Launching PyMOL from Python programs" section from here:
http://www.pymolwiki.org/index.php/Python_Integration
HTH,
Matt
On 10/24/2014 02:02 PM, Cedric wrote:
> Hi,
>
> I know how to write small scripts in pymol and then call them within pymol.
>
> But I am not sure ho
Hi,
I know how to write small scripts in pymol and then call them within pymol.
But I am not sure how to use one of pymol commands in a python script that I
can run in the terminal.
Example, I want to align a series of files in a folder but for test purposes,
let's say 1.pdb and 2.pdb… I trie