Hi Szuanne,
as "modify" implies, no new selection is created, but the current selection is
modified. If you want a new selection, do:
sele > A > duplicate
sel01 > A > modify > ...
Hope that helps.
Cheers,
Thomas
On 03 Jul 2014, at 10:49, Lapolla, Suzanne M (HSC)
wrote:
> Under the Action
Hi Martin,
are you sure os.path.curdir points to your home? Why not use one of:
os.path.expanduser('~/pdbfiles')
os.path.expandvars('$HOME/pdbfiles')
Cheers,
Thomas
On 10 Jul 2014, at 06:42, Martin Hediger wrote:
> Hi all
>
> I tried to adjust the 'fetch_path' property such that downloaded P
Hi Jose,
you can overload pymol.menu.pick_menu with your own function. The atom "index"
is the only true unique index (within the object, and it's not persistent when
removing or sorting atoms).
python
import pymol.menu
original_pick_menu = pymol.menu.pick_menu
def custom_pick_menu(cmd, sele1,
Hi Pascal,
I cannot reproduce this (I tried your example with almost every PyMOL
version from 1.2 to 1.7). Which version do you use? Are you sure those
settings are actually used and not changed by some other script? And do
you load the original 1EHZ file or a processed PDB, which might already
ha
Dear pymol users,
I came across a problem with pymol writing out pdbfiles
containing MG atoms like in 1EHZ.
I used the following options since a long time:
set retain_order, on
set pdb_retain_ids, on
set pdb_use_ter_records, off
s
