[PyMOL] Guessing bonds for a chempy model.

2013-09-17 Thread Raúl Mera Adasme
Hi all, I want to load a chempy model into PyMOL. Unfortunately, the model has all the coordinate information, but not bonds defined. I know PyMOL can guess the bonds from the distances, but it does not do it if I just use cmd.load_model, and I could not find a way of doing it. Does anyone know h

[PyMOL] New PyMOL plugin for analysis of biomolecular channels

2013-09-17 Thread Lukáš Pravda
Dear PyMOL user, we would like to inform you that there's a new PyMOL plugin available. The plugin incorporates a functionality of the new tool MOLE 2.0 for detection and analysis of channels, pores and cavities in biomacromolecules. Further information with appropriate links to the publication