in the most recent version of PyMOL, which can render measurement objects with
shaders, you can also use the distance command to get a similar result:
set use_shaders
set dash_gap, 0
distance sele and n. CA, sele and n. CA
Cheers,
Thomas
On Feb 21, 2013, at 10:11 PM, Tsjerk Wassenaar wrote:
Hi,
If you want to draw all bonds for all pairs between two selections,
you can just use bond:
bond sele and n. ca, sele and n. ca
Hope it helps,
Tsjerk
On Thu, Feb 21, 2013 at 9:19 PM, Robert Campbell
wrote:
> Hi Anasuya,
>
> On Thu, 21 Feb 2013 17:10:40 +0530
> Anasuya Dighe wrote:
>
>>
>
Hi Anasuya,
On Thu, 21 Feb 2013 17:10:40 +0530
Anasuya Dighe wrote:
>
> Hi,
>
> I have been trying to use the script draw_links.py at
> http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/ to view links
> between each pair of c-alpha atoms present in an atom selection.
> Once I load a PDB (1
Hi,
I have been trying to use the script draw_links.py at
http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/ to view links between each
pair of c-alpha atoms present in an atom selection.
Once I load a PDB (1q16.pdb) and make an atom selection, lets say : PyMOL>select
pk1, name CA in resi 5+1
Hi Yamei,
There's nothing wrong with your approach. If you like the results, and
they illustrate the point your trying to make, it's good.
Cheers,
Tsjerk
On Thu, Feb 21, 2013 at 9:22 AM, Yamei Yu wrote:
> Hi All,
>
> I want to generate a stereo image for a structure. I use
> pymol-diaplay-Ster
Hi All,
I want to generate a stereo image for a structure. I use
pymol-diaplay-Stereo mode cross-eye stereo and then I ray the figure and
save the figure.
But previously I notice the others manually rotate the model and manually
generate the figure. Is there something wrong for the first method?
