[PyMOL] finding complete residues within a RANGE OF distance cutoff

2012-02-28 Thread Anasuya Dighe
Hello , I want to extract out complete amino acid residues which fall "within a radius of 4 to 9 Angstroms from the ligand". What do I do in such a case, given the pdb id's, chain ID, the name of the ligand and its residue id? PS: I want to avoid, extracting out cmplete residues within a 0-4.5A

Re: [PyMOL] dcd trajectories in PyMOL

2012-02-28 Thread Thomas Holder
Hi Andreas, this error was introduced in the open-source tree with the updates from PyMOL 1.5. I'm not sure what the easiest fix would be, but here is how I got it to work: Download the latest VMD source code and unpack it: http://www.ks.uiuc.edu/Development/Download/download.cgi?PackageName=