Re: [PyMOL] using pymol from python script

Hi John, Is this what you're looking for?: http://www.pymolwiki.org/index.php/Launching_From_a_Script Cheers, Tsjerk On Thu, Feb 17, 2011 at 8:19 AM, John Russo wrote: > Hi, > I'm sorry for making such beginner's questions but searching the manual, > google > or the wiki didn't help me. > > I

[PyMOL] using pymol from python script

Hi, I'm sorry for making such beginner's questions but searching the manual, google or the wiki didn't help me. I know how to extend pymol by writing python functions (through the extend command). But is it possible to do the opposite? I want to write a script that loads a molecule, does someth

[PyMOL] PyMOL source compiled under 32bit Fink

Hi, I have finally gotten the PyMOL source (SVN revision 3937) compiled and running using the 32 bit Fink Python2.6 package on Mac OS 10.6.6. If there is interest, I could write down the steps I took to do so. My main reason for doing this is to be able to start PyMOL from a Python program. If

Re: [PyMOL] Getting object names

Hi Bradley, I don't think this is easily doable. (I recall doing something like this myself, but cannot find the code.) May I suggest you read (copy/paste) the following, which may help you with groups and naming: # names with dots are treated special set group_auto_mode, 2 # load the example