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17th Annual Tcl/Tk Conference (Tcl'2010)
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October 11 - 15, 2010
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Important Date
On Jul 19, 2010, at 12:29 PM, José Ignacio Sánchez Gallego wrote:
> Hi everybody,
> I have to make a 3D structure of my protein, I mutated some aminoacids in
> order to add some N-linked glycans, does anyone know is it possible to show
> the glycosilation on the surface of the 3D structure?? It
Hi Bradley,
If you have one of the latest builds, you can use this approach:
http://www.mail-archive.com/pymol-users@lists.sourceforge.net/msg07754.html
Hope it helps.
Vitaly
- Original Message -
From: Bradley Hintze
Date: Tuesday, July 20, 2010 5:37 pm
Subject: [PyMOL] get coordinates
Edited the subject. Thanks!
On Tue, Jul 20, 2010 at 6:15 PM, RaDaniel Christian 성준
wrote:
> I want to bring to your attention the wiki entry I posted in pymolwiki
> regarding the default loading paths for apbs:
> After installing with fink, none of the default paths work.
>
> http://pymolwiki.org
I want to bring to your attention the wiki entry I posted in pymolwiki
regarding the default loading paths for apbs:
After installing with fink, none of the default paths work.
http://pymolwiki.org/index.php/Talk:APBS#Making_the_default_paths_to_work.3F
If someone knows what is going on, please d
Hi Bradley,
print cmd.get_atom_coords("76/CA")
Cheers,
-- Jason
On Tue, Jul 20, 2010 at 5:39 PM, Bradley Hintze
wrote:
> Hi all,
>
> Is there an easy way to get coordinates of a given atom?
>
> e.g. 'get_coordinates /model//A/ALA`76/CA'
> for the CA coordinates of resi 76
>
> All the examples
Hi all,
Is there an easy way to get coordinates of a given atom?
e.g. 'get_coordinates /model//A/ALA`76/CA'
for the CA coordinates of resi 76
All the examples on the wiki use "iterate" to get the coordinates of a
selection. Is there a simple way to get one coordinate of a given
atom?
--
Bradle
Are you using cyrillic characters for your file names?
If yes try changing that and see what happens.
On Tue, Jul 20, 2010 at 4:35 PM, Павел Кудрявцев wrote:
> Hi,
> I'm installed Pymol version 1.2 from repository on Mandriva Linux and
> I'm constantly getting following errors when trying to op
Hi,
I'm installed Pymol version 1.2 from repository on Mandriva Linux and
I'm constantly getting following errors when trying to open/save files
Error: 1
Exception in Tk callback
Function: > (type: )
Args: ()
Traceback (innermost last):
File "/usr/lib/python2.6/site-packages/Pmw/Pmw_1_3/li
