RE: [PyMOL] scene/append

2006-05-11 Thread Warren DeLano
Huiying, It looks like PyMOL is trying to run the application bundle instead of the application executable, which is inside the bundle: HD:Applications:MacPyMOL.app/Contents/MacOS/MacPyMOL -xe HD:/Users/hli/Desktop/test.psw. Cheers, Warren -- Warren L. DeLano, Ph.D. Princ

[PyMOL] Permanent change of settings

2006-05-11 Thread Praedor Atrebates
I would like to make some settings I use permanent and default in pymol because every time I start pymol or reinitialize and load a new pdb/pse I have to make a series of changes again in the settings. Is there a file that pymol uses to set its default settings? What is its name? I want seque

Re: [PyMOL] get "MPEG-1.2.2-10.rpm"

2006-05-11 Thread Florian Haberl
hi, On Thursday 11 May 2006 10:07, 侯海峰 wrote: > Dear pymol-users > > Does someone knows where can I get the rpm package of MPEG-1.2.2-10.rpm for > makempeg? on every rpm seek machine, depends on your unix: http://rpmseek.com/rpm-pl/MPEG.html?hl=de&cs=mpeg:PN:0:0:0:0 > > In the page of PyMOL Mol

[PyMOL] Any information on matrices from alignment of states?

2006-05-11 Thread Esben Jannik Bjerrum
Hello Pymol Users Im reletalvely new to python, but have some questions regarding pymols commands with regard to rot+trls matrices. Ive used a small script to analyse domain motions, by first aligning prot2 to prot1 domain1 and then make a copy of prot2 (which reset object_matrix), align this

[PyMOL] get "MPEG-1.2.2-10.rpm"

2006-05-11 Thread 侯海峰
Dear pymol-users Does someone knows where can I get the rpm package of MPEG-1.2.2-10.rpm for makempeg? In the page of PyMOL Molecular Movie School, the author mentioned that how to make a movie under Unix. Best wishes, Haifeng Hou Biological macromolecule group