Re: [PyMOL] Producing publication quality images

2006-03-21 Thread Mark A Saper
You can easily change the resolution (dpi) of an image without changing the number of pixels, by editing the file in Photoshop (in Image Size, change resolution without rescaling) or in GraphicConverter (on Mac). _ Mark A. Saper, Ph.D. Associate Professor of B

RE: [PyMOL] Producing publication quality images

2006-03-21 Thread Michael George Lerner
It's not pretty, and this is easy enough to do by hand, but I've had enough people ask me about this that I hacked up a little rendering plugin just now. Can someone grab it from http://www-personal.umich.edu/~mlerner/PyMOL/rendering.py put it in $PYMOL_PATH/modules/pmg_tk/startup/ (or whatev

Re: [PyMOL] stereo: should wait for LCD solutions in near future?

2006-03-21 Thread Ricardo Aparicio
Warren, Thank you for replying. Cheers, Ricardo Warren DeLano wrote: Ricardo, A 20+" 1600-1920 by 1200 pixel "switchable" stereo LCD display based on Parallax Barrier at a $2-3,000 price point would have a good shot at displacing shutter glasses -- but I don't know that any such product ye

RE: [PyMOL] Producing publication quality images

2006-03-21 Thread Terry Jones
Thanks Warren, I'll try that. I got two other replies, neither mentioning the 300dpi arg to png. If that isn't recognized, I'll upgrade. Terry

RE: [PyMOL] Producing publication quality images

2006-03-21 Thread Warren DeLano
Terry, The trick is to render large and then reduce. With recent versions, you can do something like this # To get a 300 dpi PNG file for a 4 inch by 3 inch image... # Ray-traced: ray 1200,900 png hires_ray.pdb, dpi=300 # OpenGL: draw 1200,900 png hires_ogl.pdb, dpi=300 Cheers, Warren -- W

[PyMOL] Producing publication quality images

2006-03-21 Thread Terry Jones
Hi. I'm wondering if there's a way to make pymol produce high-quality images suitable for publication. I've used ray/png to produce images, but the person I pass them on to tells me they're only 50 to 100 dpi, and they're wanting 300 dpi if possible. Is there a way to do this in pymol? Or can I e

[PyMOL] Red-Blue anaglyph in Pymol

2006-03-21 Thread Jean-Christophe AME
Hello, I was wondering if it is possible to produce Red-Blue Anaglyph using pymol either in "live" or static. I saw a demo site of pymol where it seems to be possible (http://www.sciencesoft.at/index.jsp? link=pymol&lang=en), but how ? Or is it planned for a next version of Pymol. Thanks.