[PyMOL] setting stereo separation distance in pymol

2005-02-09 Thread Sri Krishna Subramanian
Dear all, I am new to this list and apologize if this question has been asked before. I am trying to figure out if it is possible to set the stereo separation in PyMOL while viewing the molecule interactively. I want to see the protein using wall-eyed stereo and would like to bring the left

[PyMOL] pymol & apbs

2005-02-09 Thread Douglas Kojetin
I just download & compiled apbs on a G4 using the instructions found here: http://www.chemistry.ucsc.edu/~wgscott/xtal/programs.html (although I had to modify the fink files slightly, it was a relatively painless installation) Many thanks for the apbs_tools plugin -- very cool! Is there any

Re: [PyMOL] Stereo Segmentation fault

2005-02-09 Thread Charles Moad
Follow up to this. At least on one machine of the machines mentioned, this script works fine when I copy/paste each line into idle. Strange Charles Moad wrote: The CVS version in linux seg faults when trying to launch this simple stereo startup script. I get this on two very different li

[PyMOL] Stereo Segmentation fault

2005-02-09 Thread Charles Moad
The CVS version in linux seg faults when trying to launch this simple stereo startup script. I get this on two very different linux distros and dependency versions. #!/usr/bin/env python # Tell PyMOL we don't want any GUI features. import __main__ __main__.pymol_argv = [ 'pymol', '-Gi' ] #