Thank you, Bruno and Tsjerk. I found both approaches work very well.
Eric
Frankly, with Pymol, people don't as far as I know. What I usually do
is
determine for the first frame of the individual pdb files (obtained
with
trjconv -sep) the orientation, viewing point and appearance. This I
save
Hi,
Did you get an answer to this already? I've been swamped recently, so I
haven't answered many PyMOL/APBS questions. Anyway ..
I don't know anything about MSMS data and plotting surfaces, but I know a
bit about PyMOL + APBS. APBS calculations (like a lot of other
electrostatics calculations
Hello Peter,
This is something I've been struggling with for awhile now. You can
export a povray file from PyMol (just search the list archives), but at
the moment that's about it. I have written a small python plugin for
Blender that can import the smooth_triangles from a PyMol/povray file.
O
Dear Pymol users,
Does anyone know if there is a way to export surfaces into a file format
suitable for import into 3D modellers (ie. Blender, 3DSMax, Lightwave, etc)?
For that matter, is it possible at all to export anything in pymol?
I realize that asking for support of a particular 3D file f
Hi labelers,
I almost don't dare say this here, but for depth cued labels the best
program/interface that I would know of is Lothar Esser's GL_RENDER. As
far as I understand it is a graphical front end to bobscript/molscript
that allows you to attach labels to atoms by clicking on them. The
p
