Thanks Scott. I have tried sticks (and it works) but it doesn't look very good for what I'm trying to show. The really annoying part about this lines issue is that it doesn't ALWAYS happen. And i can't seem to find any relation between the times it does save the lines versus the times it doesn't
PyMOL Users,
A major PyMOL sponsor is having problems with the Mobility Radeon 9000 chip
on their Dell laptops under Windows XP. I am curious to know whether others
have seen or are encountering similar problems with this chipset. The issue
is as follows:
When attempting to choose atoms using t
Hello PyMol and APBS communities,
I am here to report the successful compilation and installation of APBS
on a Macintosh (Powerbook G4, OS X 10.3.5, XCode1.5, gcc 3.3 20030304
(Apple Computer, Inc. build 1666),g77 3.4.1, and Python 2.3.3), and
integration with PyMol via Michael Lerner's APBS pl
Hi Greg,
You might need to display your sidechains as sticks rather than lines
in order for them to be visible when you write out your image file. Or
perhaps, if you are not already doing it, you should raytrace your
scene by hitting the "ray" button before you write out your image file.
Scott
Hi all,
I am having a problem I hope someone can help me with. I have loaded some
OMIT maps into pymol. I want to display the density around my CoA ligand
and nowhere else. I have tried using the carve attribute to limit how far
away from my ligand the density is displayed but to no avail.
Hello all,
I'm having a problem saving the pymol output as an image. I'm working with asingle alpha helix (~25 residues) with the residues displayed as lines, the backbone as a ribbon, and one or more of the residues as spheres. When i go to save the image, the lines are no longer present in the
