Howdy,
I've started writing some more intricate scripts for a movie my prof's
doing _very_ soon.
I have PyMol 0.95 on either a Dual Xeon 3.4 or a Dual Opteron 240 64-Bit
both running Linux 2.6.5. Using 'mencoder' to encode movies.
We've made great progress but would like to mimic a photon by us
Daqi,
Not sure if this is exactly what you're asking, but, as of v0.88, alter
the "cartoon_highlight_color" setting to get Molscript-like effects.
For example:
set cartoon_highlight_color, grey70
See "http://chips.csb.ki.se/pymol/msg01017.html"; for more info.
Cameron
=== d...@mail.
Christian,
This isn't implemented yet, but it is on the to do list.
Cheers,
Warren
> -Original Message-
> From: pymol-users-ad...@lists.sourceforge.net
> [mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of
> Christian Rummey
> Sent: Thursday, April 22, 2004 2:35 AM
hi ppl,
is there a way to sort the list of objects/selections in the panel on the
right side other than loading/selecting stuff in a specific order?
simple example: I compare several ligands in a specific site, and save the
data as pymol sessions; after adding new ligands//site conformations I'd
Hi, all:
I just picked up pymol tonight and found it quite impressive.
Does anyone know how to color one side of a molecular surface with one color
and the other side with a different color? Thanks in advance.
daqi
Mark,
The sphere_scale setting is a multiplier of the atom's VDW radius.
If you want to set exact radii, use "alter":
alter selection, vdw=number
eg. alter (all), vdw=1.0
rebuild
Cheers,
Warren
> -Original Message-
> From: pymol-users-ad...@lists.sourceforge.net
> [ma
