RE: [PyMOL] sphere scale

2004-04-21 Thread Warren DeLano
Mark, The sphere_scale setting is a multiplier of the atom's VDW radius. If you want to set exact radii, use "alter": alter selection, vdw=number eg. alter (all), vdw=1.0 rebuild Cheers, Warren > -Original Message- > From: pymol-users-ad...@lists.sourceforge.net > [ma

[PyMOL] different colors for two sides of a surface

2004-04-21 Thread daqi
Hi, all: I just picked up pymol tonight and found it quite impressive. Does anyone know how to color one side of a molecular surface with one color and the other side with a different color? Thanks in advance. daqi

RE: [PyMOL] sphere scale

2004-04-21 Thread Warren DeLano
Mark, The sphere_scale setting is a multiplier of the atom's VDW radius. If you want to set exact radii, use "alter": alter selection, vdw=number eg. alter (all), vdw=1.0 rebuild Cheers, Warren > -Original Message- > From: pymol-users-ad...@lists.sourceforge.net > [ma

RE: [PyMOL] sphere scale

2004-04-21 Thread Warren DeLano
Mark, The sphere_scale setting is a multiplier of the atom's VDW radius. If you want to set exact radii, use "alter": alter selection, vdw=number eg. alter (all), vdw=1.0 rebuild Cheers, Warren > -Original Message- > From: pymol-users-ad...@lists.sourceforge.net > [ma

[PyMOL] sphere scale

2004-04-21 Thread Mark Del Campo
Anybody know the precise size in angstroms corresponding to a given sphere scale? For instance, does a sphere_scale of 1.0 equal a radius of 1.0 angstrom? Thanks in advance!! Mark Del Campo Univ. of Miami Malhotra lab __ Do you Yahoo!?