Hi folks:
Why is "spectrum" and the internal gui (which I assume invokes
"spectrum") so much faster than util.rainbow ?
I like the util.rainbow default color scheme a bit better, but it takes
forever for large complexes. Is there a simple way to get spectrum
to mimic the rainbow color schem
Hello to all,
I have created a GUI for a particular application I am
developing in Matlab. I would love to be able to call
Pymol and operate it from within this GUI.
My GUI does certain calculations on protein based structures and
I do need to visualize the results; in particular, I would
be int
Thanks! And the util.rainbow works, too, but it produces different result
than the default spectrum.
However, there seems to be no PyMOL API for spectrum:
cmd.spectrum
So unfortunately I am unable to code that command in a python loop.
(or I am missing something again?)
-shuhsien
-Orig
Yes, it's called spectrum...but it looks like the docs don't exist yet.
PyMOL>spectrum ?
Usage: spectrum [ expression [, palette [, selection [, minimum [, maximum
[, byres [, quiet ]]]
eg:
spectrum b
spectrum q
spectrum b, selection=my_obj
spectrum b, minimum=5, maximum=60
spectrum count, s
Hi,
I have a naïve question here. Is there any command line equivalent to using
the menu color the by spectrum (rainbows and etc)?
Thanks!
-shuhsien
On Thu, Feb 19, 2004 at 12:24:53PM +0100, Michael Banck wrote:
> On Thu, Feb 19, 2004 at 08:22:14AM +0100, Thomas Siegmund wrote:
> > For me PyMol on SuSE 8.2 crashed always when raytracing a line element.
>
> That seems to be identical to Debian Bug #229080
> (http://bugs.debian.org/229080)
>
>
Dear PyMOLers,
It was brought to my attention yesterday that 2 of my scripts had
problems with their selection routines, so I've put repaired versions up
on my web site. They are:
color_by_attype.py
seq_select.py
The problems arose if you had more than one object up with multiple
chains and trie
