i have pymol installed on an OSX machine. When I begin pymol i am in
the root ("\") directory. My scripts are in a different directory. Is
there a way I can begin in another directory when starting Pymol?
cheers
Lesley
Dear Roger,
I probably have a very simple solution for you. First create two
objects of your protein with a distinct names. Then show a
non-transparent surface for one of the objects. Hide the surface for
the residues you'd like to see under the transparent surface with a
comand:
"hide surf