Re: [PyMOL] Creating hydrophobic surfaces

Hi Jason, * jkyano [2003-10-01 11:51] wrote: > I am looking for a free program or script that can spit out sidechain > hydrophobicity in the B factor column so that I can color a surface by > hydrophobicity using the color_b.py script. I have a data2bfactor.py script that will alter the B-val

[PyMOL] Creating hydrophobic surfaces

Hi All, I am looking for a free program or script that can spit out sidechain hydrophobicity in the B factor column so that I can color a surface by hydrophobicity using the color_b.py script. Thanks, Jason PS has anyone tweeked the script to go from green to yellow/white? *

[PyMOL] Is it possible to specify the resolution for a GRASP output rgb file?

Jason In short, YES, you can increase the surface resolution in GRASP. Check out these links http://honiglab.cpmc.columbia.edu/grasp/grasp_contents.html and for making high resolution "Good Quality" surfaces check out http://pov4grasp.free.fr/tutorials/quality.php good luck Scott On Frid