[PyMOL] how to change radius of cylindrical helix

Dear All, I got a simple question here, how to change radius of CYLINDRICAL HELICES(I actually want to make default cylindrical helices thiner). Thanks very much in advance Best regards yibin

[PyMOL] selection around

Hi, we're trying to figure out how close two subunits of a protein are to each other. We've done select around 6 and got one residue from the other subunit, but then when we reverse the process using the found residue we don't pick up anything on the first subunit. I did a bit of experimenti

RE: [PyMOL] pkfrag

David, I am experimenting with some new stuff along these lines which will provide much greater control over what moves and what doesn’t. For the time being, try using the “protect” and “deprotect” commands to control which atoms are subject to transformation. Cheers, Warren -- mailto:

[PyMOL] Drawing dashed lines

Hi All, I was wondering if it is possible to draw dashed lines connecting two residues similar to the following molscript commands: set linedash 5.0; set linewidth 6; set linecolour red; set bonddistance 5.0; bonds require atom O2 and in residue A501 require atom N and in re

[PyMOL] pkfrag

Hi, Is there a way to explicitly control which atoms end up in pkfrag1 and pkfrag2? Specifically, I'd like to be able to move/rotate fragments which are made of multiple molecules or are internal loops. Using pkbond or pkatom to break between fragments doesn't give me enough control. Selectin