I am working on making some cartoon-ribbon figures and I wonder if there is
any consensus on how to represent secondary structures other than
alpha-helices and beta-sheets. My particular protein has a couple of helices
that DSSP assigns as 310-Helices. Do I just stick HELIX records in the pdb
Dear Pymolers,
In the on-line help (of `iterate_state'), I found examples that
one can iterate through atoms and obtain their x value.
But I tried on my local installations (both Win and Linux),
an error was there when I tried to access 'x' value, for example.
But I can access other properties lik
Jason,
I think the solution is to create a copy of the object, then render one
copy as cartoon, and the other as sticks. The colouring will then be
independent.
By the way, does anyone kwow if it is possible to invoke the command
window after startup? I normally launch PyMOL with -x, but som