Dear Nat,
Thanks for the trick.
This sounds like a good method, in general.
I will do this when I finish debugging my code
and start to work on many files.
I was just curious if we can do this in a program.
Perhaps this is actually a Python problem,
not a Pymol specific problem.
Regards,
K.K.Lian
Hello:
I am trying to color residues off a cartoon loop and want to color the
sticks version of the residue down to the Ca, but not the Ca itself
(ie. the residue and the cartoon are different colors). The
problem is that if I color the Ca, then that section of the cartoon also
gets colored. If
> Is there a way to keep my program 'quiet',
> or I can customize the output message myself?
Depending on your OS and shell, something like this may work:
denethor:~ > /usr/local/pymol/pymol.com >/dev/null 2>/dev/null
This works under Bash in any modern Linux distribution, from what I've
seen.
I would like to make one isosurface transparent, and leave another solid
(or set different levels of transparency for each). I know
object-specific transparency works for molecule objects, e.g.
load molA.pdb, A
load molB.pdb, B
show surface, A
show surface, B
set transparency, 0.5, A
(
