RE: [PyMOL] picking atoms on a Win 2000 machine

2002-03-03 Thread Flip Hoedemaeker
Thanks Warren, I can set my depth cue to 24-bit (I'm running Pymol on a sony vaio SR1K laptop) and this works fine. Great package! I'll be waiting for the minimiser so I can do RSR on my laptop! Flip -Original Message- From: DeLano, Warren [mailto:war...@sunesis.com] Sent: Friday, March

RE: [PyMOL] superimpose

2002-03-03 Thread DeLano, Warren
Michael, The 'fit' command will do atom-for-atom RMS alignments, but all atom attributes must match within each object (segment, chain, residue id, residue name, atom name, etc.) for this to succeed. As a result, the 'fit' command can be tricky to use. Several 'alter' commands and a 'sort', a

[PyMOL] superimpose

2002-03-03 Thread Michael S. Cosgrove
Dear Sir, Does Pymol have the capability to superimpose molecules? If so how? Thanks, Michael Michael S. Cosgrove, Ph.D. Postdoctoral Fellow Johns Hopkins School of Medicine Department of Biophysics and Biophysical Chemistry 725 N. Wolfe Street, WBSB 603 Baltimore MD, 21205