[Open Babel] Cant activate Confab

2016-02-27 Thread alfredoq
Dear OBabel user: I have been struggling to activate the Confab module of obabel for several day without any luck. I compiled Open Babel 2.3.2, installed all the required libraries (including EIGEN) as mentioned in the provided INSTALL file, and carefully followed all the instructions. After compil

Re: [Open Babel] question regarding error messages and poor results

2016-02-27 Thread Tim Vandermeersch
Hi, It looks like it can't find the template ring templates. You can set the BABEL_DATADIR environment variable to fix this. This should result in better coordinates. Tim On Feb 26, 2016 14:22, "Moshe Ben-zion" wrote: > I would greatly appreciate some help with my problem. > > I am not a linux

Re: [Open Babel] question regarding error messages and poor results

2016-02-27 Thread Andreas Kempe
obabel is looking for data files that contain atom definitions, force field parameters and so on. You need to set the enviroment variable BABEL_DATADIR either globally or in your batch file, e.g. add set BABEL_DATADIR=C:\ProgramData\OpenBabel-2.3.1\data The directory might be different on your