Re: [Open Babel] Pybel's 'FP4' fingerprint bug report

2011-12-03 Thread Mingyue Zheng
Great! Many thanks for your help! Mingyue 2011-12-01 Mingyue Zheng, Ph.D. Drug Discovery and Design Center (DDDC) Box 1201, Shanghai Institute of Materia Medica. No. 555 Rd. Zuchongzhi, Shanghai, China Tel: 86-021-50806600-1308 Email: myzh...@mai

Re: [Open Babel] Pybel's 'FP4' fingerprint bug report

2011-11-30 Thread Noel O'Boyle
Fixed in trunk in r4679. See https://sourceforge.net/tracker/index.php?func=detail&aid=3431239&group_id=40728&atid=428740 - Noel On 31 October 2011 19:34, Chris Morley wrote: > I have added this to bug #3431239 to which it seem be related. > > With its stereochemistry mol1 fails when making a

Re: [Open Babel] Pybel's 'FP4' fingerprint bug report

2011-11-01 Thread Noel O'Boyle
I'll try and sort out SMARTS stereo this side of Christmas. There are several pieces to be done. - Noel On 31 October 2011 19:34, Chris Morley wrote: > I have added this to bug #3431239 to which it seem be related. > > With its stereochemistry mol1 fails when making an FP4 fingerprint (lots > of

Re: [Open Babel] Pybel's 'FP4' fingerprint bug report

2011-10-31 Thread Chris Morley
I have added this to bug #3431239 to which it seem be related. With its stereochemistry mol1 fails when making an FP4 fingerprint (lots of SMARTS matching). But without the stereochemistry it is ok. Chris On 31/10/2011 16:37, Mingyue Zheng wrote: > Hi all, > I found my python script unexp