Re: [Open Babel] obgrep doesn't work on .sdf

2013-08-17 Thread Chris Swain
obgrep used to guess the file type based on the extension but it does not seem to work now. Chris On 8 Aug 2013, at 10:30, openbabel-discuss-requ...@lists.sourceforge.net wrote: > Message: 2 > Date: Thu, 8 Aug 2013 09:59:54 +0200 > From: Pascal Muller > Subject: Re: [Open Babel] Fwd: obgrep doe

Re: [Open Babel] obgrep doesn't work on .sdf

2013-06-11 Thread Craig James
On Tue, Jun 11, 2013 at 2:34 AM, Pascal Muller wrote: > Dear all, > > Usually, I use obgrep (Open Babel 2.3.2) with smiles files, but today I > tried with an sdf - and it doesn't work. There is no match, and no error > message (e.g. > obgrep 'C' methane.sdf > gives no output, as if there were no m

[Open Babel] obgrep doesn't work on .sdf

2013-06-11 Thread Pascal Muller
Dear all, Usually, I use obgrep (Open Babel 2.3.2) with smiles files, but today I tried with an sdf - and it doesn't work. There is no match, and no error message (e.g. obgrep 'C' methane.sdf gives no output, as if there were no match. Tried with and without H in the sdf). With smiles format, obg