Yes, it was on the same machine (stack was 8192kb)
2017-04-27 17:24 GMT+02:00 Noel O'Boyle :
> Nice digging down. I presume that this was on the same machine?
>
> It could be something to do with changes in string handling (in the
> compiler), particularly if you are a fan of flags for recent
> s
On 4/27/2017 10:24 AM, Noel O'Boyle wrote:
> ... we don't want
> to trade off too much speed for the common case (e.g. by allocating
> everything on the heap), but it's good to keep an eye on it.
I very much doubt the speed difference for the common case will be
noticeable to the user, or even i
Nice digging down. I presume that this was on the same machine?
It could be something to do with changes in string handling (in the
compiler), particularly if you are a fan of flags for recent
standards.
We should definitely try to streamline our handling of large molecules
though, and we should
>> If there is a way, in future versions, to change the stack
>> limit in OpenBabel, I think it could be useful.
>
> Not really, even if there was a way: someone'll just try to load a
> larger structure and hit the same thing again.
Moreover, it's a type of denial of service attack on the underl
On 4/26/2017 12:49 PM, Nicolas Cheron wrote:
> If there is a way, in future versions, to change the stack
> limit in OpenBabel, I think it could be useful.
Not really, even if there was a way: someone'll just try to load a
larger structure and hit the same thing again.
Dima
--
After digging a little bit, I found the cause of the problem, and it is not
(directly) linked to OpenBabel. I have found that a code as simple as:
#include
using namespace std;
int main(int nbarg, char * argv[])
{
string List[40];
return 0;
}
can compile with g++5.4 but returns a segme
No known problems. Could you file a bug?
On 22 Apr 2017 1:51 p.m., "Nicolas Cheron"
wrote:
> Dear all,
>
> I have a code in C++ that uses the OpenBabel library. Everything is
> working smoothly with gcc4.8 or 4.9 (used to compile both OpenBabel and my
> code). However, when I am using gcc5 and a
Dear all,
I have a code in C++ that uses the OpenBabel library. Everything is working
smoothly with gcc4.8 or 4.9 (used to compile both OpenBabel and my code).
However, when I am using gcc5 and above (I tried 5.4 and 6.3) I found some
problems. For example, one of them seemed to be that I can not
