On 08/08/2012 20:15, Rob Smith wrote:
> Is there a way (like obabel -L svg) to get the GENOPTIONS? I am
> struggling to get the -s " " section to transfer
> programmatically.
The -s option is not part of SVGFormat and works on the internal OBMol
object, so you can also see the color when it is ou
Is there a way (like obabel -L svg) to get the GENOPTIONS? I am
struggling to get the -s " " section to transfer
programmatically.
I've tried a lot of variants, the current one being:
self.obconv.add_option("s #{substructure}
red",OpenBabel::OBConversion::INOPTIONS)
The go
> characters to complete the translation of the command line argument
> for what I am trying to do:
>
> obabel benzodiazepine.sdf.gz -O out.svg --filter "title=3016" -s
> "c1ccc2c(c1)C(=NCCN2)c3c3 red" -xu -d
Keep in mind that if you're doing it programmatically, you don't use the 'x'
part o
On 07/08/2012 23:02, Rob Smith wrote:
> Does anyone know of a comprehensive list of the OBConversion
> OUTOPTIONS characters? I am trying to extend a ruby wrapper we are
> developing for openbabel, and I'm having trouble locating the correct
> characters to complete the translation of the command l
On Tue, Aug 7, 2012 at 3:02 PM, Rob Smith <2robsm...@gmail.com> wrote:
> Does anyone know of a comprehensive list of the OBConversion
> OUTOPTIONS characters?
This is a bit of a hack, but...
for format in `babel -H | tail -n +16 | egrep -v '^[- A-Z]' | sed -e
's/ .*//'` ; do echo "---
Does anyone know of a comprehensive list of the OBConversion
OUTOPTIONS characters? I am trying to extend a ruby wrapper we are
developing for openbabel, and I'm having trouble locating the correct
characters to complete the translation of the command line argument
for what I am trying to do:
obab
