Re: [Open Babel] Multimolecule canonical SMILES

2014-02-14 Thread Geoffrey Hutchison
> I have a number of multimolecular complexes that I'm converting into > canonical SMILES. Some of these molecules are carbon monoxide, and I am > noticing that sometimes they are written as [C]=O, and sometimes as O=[C]. > > Is the expected behavior of canonical SMILES - or should it instead

[Open Babel] Multimolecule canonical SMILES

2014-02-04 Thread Lee-Ping Wang
Hi there, I have a number of multimolecular complexes that I'm converting into canonical SMILES. Some of these molecules are carbon monoxide, and I am noticing that sometimes they are written as [C]=O, and sometimes as O=[C]. Is the expected behavior of canonical SMILES - or should it instea