Re: [Open Babel] Iterate and convert .smi to multiple .png

2022-10-14 Thread Chris Swain via OpenBabel-discuss
Hi, Something like /Users/username/miniconda3/bin/obabel -ismiles '/Users/chrisswain/Desktop/SampleFiles/test.smiles' -opng-O '/Users/cusename/Desktop/SampleFiles/test'.png -m Seems to work for first structure but subsequent images seem broken? Cheers, Chris _

[Open Babel] Iterate and convert .smi to multiple .png

2022-10-13 Thread Azman, Adam
New OpenBabel user. I have an .smi file with several molecules in the same file, one per line. I would like to convert those SMILES into a png. I can do that on the OpenBabelGUI, but all molecules are contained within the same single .png file. I would like individual .png files for each molecu