Re: [Open Babel] Add comments to output file

2014-07-22 Thread Jim Parker
Geoff, That works! Thanks. Cheers, --Jim On Sun, Jul 20, 2014 at 11:04 PM, Geoffrey Hutchison < geoff.hutchi...@gmail.com> wrote: > > But I would like to add comments, e.g. REMARK lines in the .pdb file > > These are set using OBPairData, so you'd want to add "REMARK" as the key > and then t

Re: [Open Babel] Add comments to output file

2014-07-20 Thread Geoffrey Hutchison
> But I would like to add comments, e.g. REMARK lines in the .pdb file These are set using OBPairData, so you'd want to add "REMARK" as the key and then the comments. For example with Pybel: http://openbabel.org/docs/dev/UseTheLibrary/Python_PybelAPI.html#pybel.MoleculeData mol = readfile(…..).

[Open Babel] Add comments to output file

2014-07-20 Thread Jim Parker
Hello, I would like to add some comment strings to .pdb or .mol2 files that I generated using the python openbabel module. I can write the molecule easily enough with appropriately initialized OBMol and OBConversion objects and the .WriteFile() method But I would like to add comments, e.g. RE