Re: [Open Babel] Asking about SMARTS

2011-03-02 Thread NGUYEN Thanh Binh
Hi, I have said clearly about my problem. Sorry ! I want to ask about the position of the fonctional groups within the molecules. For example, i have the substance like C(C)CC=C. Can i use Pybel for determining the position of branch CH3 at the position 2 in this molecule ? Many thanks in advanc

Re: [Open Babel] Asking about SMARTS

2011-03-01 Thread NGUYEN Thanh Binh
Hi Fredrik, Can i determine the position of the fonctional groups within the molecules with pybel _ openbabel ? Thank you in advance for your help. T-B 2011/2/24 NGUYEN Thanh Binh > Hi again, > > I am preparing a file for you , but now it is not important. Indeed, i have > used F

Re: [Open Babel] Asking about SMARTS

2011-02-24 Thread NGUYEN Thanh Binh
> > Could you please send a small list of SMILES and the expected result along > with your code so that we can see what's happening. Please also cc the list. > > Kind regards, > Fredrik > > 24 feb 2011 kl. 10.45 skrev NGUYEN Thanh Binh: > > Thank you very much Mr.

[Open Babel] Asking about SMARTS

2011-02-24 Thread NGUYEN Thanh Binh
Dear, My name is NGUYEN Thanh Binh. I am working about the SMARTS parsing. I have used the library OPENBABEL to do it. But i have a problem that needs your help. My following problem is : When i have constructed SMARTS Formulas in order to parse and to count the fonctional groups for the alpha

[Open Babel] Ask for SMILES + C++

2011-01-14 Thread NGUYEN Thanh Binh
Dear, My name is NGUYEN Thanh Binh. I have now a problem with SMILES. I have taken the database with SMILES from DIPPR. Now i want to use C++ in order to read these structures SMILES and give me the result with the number of the functions within it. For example : i have a SMILES C=CCC. It means