Re: [Open Babel] SMARTS output format

2012-10-16 Thread J Birch
it would be > good to know, because I could add that to the feature requests. You can > google it. If you have the openbabel prerequisites, ruby and rubygems > installed, you just write "gem install rubabel" and it will install > everything you need. > > On Tue, O

Re: [Open Babel] SMARTS output format

2012-10-16 Thread J Birch
e, Oct 16, 2012 at 7:05 PM, J Birch wrote: >> Is there any know SMART output format for Open Babel? If not Open Babel, >> and other chemistry development kit? > > OpenBabel does not currently support this. The main reason for this is > that OB currently does not manipulat

[Open Babel] Fragmentation algorithm

2012-10-16 Thread J Birch
Is there an algorithm that will fragment a molecule finding all 'fragments', not 'paths' in the given molecule within a certain size, say 3-7? I am not sure if Fingerprinting does this. Birch -- Don't let slow site perf

[Open Babel] SMARTS output format

2012-10-16 Thread J Birch
Is there any know SMART output format for Open Babel? If not Open Babel, and other chemistry development kit? Thanks! Birch -- Don't let slow site performance ruin your business. Deploy New Relic APM Deploy New Relic app