Re: [Open Babel] Problems with binding Python

2012-11-25 Thread elikbelik
Ubuntu 12.10 (64-bit). If I'm compiling the release without swig, then I don't get any python bindings. -- View this message in context: http://forums.openbabel.org/Problems-with-binding-Python-tp4655705p4655711.html Sent from the General discussion mailing list archive at Nabble.com.

Re: [Open Babel] Error in cmake

2012-11-25 Thread Geoffrey Hutchison
> Performing Test SCANDIR_NEEDS_CONST - Failed > -- Performing Test HAVE_GCC_VISIBILITY There were no problems with compilation. Cmake is trying to figure out your system. The message should probably say "Not needed" but the compile went fine; > [ 99%] Building CXX object test/CMakeFiles/test_u

Re: [Open Babel] Problems with binding Python

2012-11-25 Thread Noel O'Boyle
You shouldn't need Swig yourself if you are using the release, only if compiling from the SVN repo... What version of Ubuntu? - Noel On 25 November 2012 08:56, elikbelik wrote: > Hi, > I'm trying to build openbabel 2.3.2 on ubunto with python bindings. > I tried using swig2.0.7 and swig1.3.40, b

Re: [Open Babel] Tidying up files

2012-11-25 Thread Chris Swain
Hi, Here is a list of abbreviations I have compiled over the years. Ac, Ace, Acetate, Acetyl, Acyl AcAc acetoacetyl ACN = acetonitrile Ad = 1-adamantyl Alloc, AOC = allyoxycarbonyl All, Allyl Bam = benzamidomethyl BDMS = biphenyldimethylsilyl BOC, Boc, t-boc = t-butoxycarbonyl BOM = benzyloxymet

[Open Babel] Problems with binding Python

2012-11-25 Thread elikbelik
Hi, I'm trying to build openbabel 2.3.2 on ubunto with python bindings. I tried using swig2.0.7 and swig1.3.40, but keep on getting the following errors: Linking CXX shared module ../lib/_openbabel.so CMakeFiles/bindings_python.dir/python/openbabel-python.cpp.o: In function `_SWIG_This': /home/mil