Re: [Open Babel] PHP binding

2012-04-02 Thread Geoff Hutchison
On Apr 2, 2012, at 5:34 PM, mwojcikowski wrote: > Since web-interfaces are incredibly popular it would be a nice feature to > have openbabel built in PHP. I guess it would not be so hard, since we need > to create just php interface file for SWIG. The security implications scare me, but as you s

[Open Babel] PHP binding

2012-04-02 Thread mwojcikowski
Since web-interfaces are incredibly popular it would be a nice feature to have openbabel built in PHP. I guess it would not be so hard, since we need to create just php interface file for SWIG. You can treat that post as a feature request although, I'd like to offer my help if needed. I think perl

Re: [Open Babel] Smirks and tautomers (mesomers)

2012-04-02 Thread Samuele Sommariva
I had a pretty busy week. Thank you for your answer, and forgive my delay. Thank you for your answer; it actually help to partially tackle the problem: there was a problem in the SMARTS I wrote (even if I cannot "see" it) Since it is possible to transform groups for tautomers, it should be possibl

[Open Babel] Wrong Smarts connectivity? (and thank you for all the previous helps)

2012-04-02 Thread Samuele Sommariva
I know radicals are not fully supported (correct valence is available only in the developer version), and I don't really know if I should fill a bug report or add a request for future release. My question: shouldn't the connectivity (in SMARTS X) be, by definition, lower than or equal to the valen