[jira] [Commented] (CTAKES-405) Installation not possible

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-405?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16728719#comment-16728719 ] Sean Finan commented on CTAKES-405: --- I cannot duplicate this error.  There is no text "

[jira] [Commented] (CTAKES-449) PolarityCleartkAnalysisEngine slow for large documents

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-449?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16728741#comment-16728741 ] Sean Finan commented on CTAKES-449: --- The CleartkExtractor contexts each have select() m

[jira] [Closed] (CTAKES-527) getting exception w/ AggregatePlaintextFastUMLSProcessor: Initialization of annotator class "org.apache.ctakes.dictionary.lookup2.ae.DefaultJCasTermAnnotator" failed

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-527?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Sean Finan closed CTAKES-527. - Resolution: Resolved > getting exception w/ AggregatePlaintextFastUMLSProcessor: Initialization of > ann

[jira] [Commented] (CTAKES-521) Please specify PARAM_IS_TRAINING - unable to infer it from context

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-521?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16728760#comment-16728760 ] Sean Finan commented on CTAKES-521: --- The error message is incorrect.  It comes from Cle

[jira] [Assigned] (CTAKES-525) Can't create custom dictionaries for resources with a dash in their names

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-525?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Sean Finan reassigned CTAKES-525: - Assignee: Sean Finan > Can't create custom dictionaries for resources with a dash in their names

[jira] [Commented] (CTAKES-519) Polarity not working with Piper files

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-519?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16728761#comment-16728761 ] Sean Finan commented on CTAKES-519: --- Can you please post: 1.  The lines that you have

[jira] [Commented] (CTAKES-518) How to run Simple Pipline fabricator GUI using the development version?

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-518?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16728762#comment-16728762 ] Sean Finan commented on CTAKES-518: --- Please perform a search on running classes in java

[jira] [Commented] (CTAKES-516) cTAKES Piper File Submitter doesn't write xmi file to output directory

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-516?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16728765#comment-16728765 ] Sean Finan commented on CTAKES-516: --- You need to specify that you want to output .xmi f

[jira] [Closed] (CTAKES-516) cTAKES Piper File Submitter doesn't write xmi file to output directory

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-516?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Sean Finan closed CTAKES-516. - Resolution: Not A Bug > cTAKES Piper File Submitter doesn't write xmi file to output directory >

[jira] [Closed] (CTAKES-518) How to run Simple Pipline fabricator GUI using the development version?

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-518?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Sean Finan closed CTAKES-518. - Resolution: REMIND Fix Version/s: 4.0.1 > How to run Simple Pipline fabricator GUI using the devel

[jira] [Commented] (CTAKES-515) Failing to compile runPiperGui profile in Intellij

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-515?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16728767#comment-16728767 ] Sean Finan commented on CTAKES-515: --- This looks like an exception in maven.  Can anybod

[jira] [Commented] (CTAKES-513) How does I test my text in Eclipse after following all the steps for the installation of ctakes and its projects for Eclipse?

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-513?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16728769#comment-16728769 ] Sean Finan commented on CTAKES-513: --- For a quick test you can run one of the classes in

[jira] [Closed] (CTAKES-513) How does I test my text in Eclipse after following all the steps for the installation of ctakes and its projects for Eclipse?

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-513?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Sean Finan closed CTAKES-513. - Resolution: Not A Bug Assignee: Sean Finan > How does I test my text in Eclipse after following all

[jira] [Commented] (CTAKES-450) CDASegmentAnnotator misses all headings after empty segment

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-450?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16728772#comment-16728772 ] Sean Finan commented on CTAKES-450: --- Can this be closed? > CDASegmentAnnotator misses

[jira] [Commented] (CTAKES-471) i cant load the Apache Ctakes AggregatePlaintextFastUMLSProcessor.xml file

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-471?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16728773#comment-16728773 ] Sean Finan commented on CTAKES-471: ---  You can look at ctakes-examples-res/.../pipeline/

[jira] [Commented] (CTAKES-471) i cant load the Apache Ctakes AggregatePlaintextFastUMLSProcessor.xml file

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-471?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16728775#comment-16728775 ] Sean Finan commented on CTAKES-471: --- Though some of the basic annotators can handle gen

[jira] [Commented] (CTAKES-474) CTakes help getting sign /symptoms

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-474?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16728776#comment-16728776 ] Sean Finan commented on CTAKES-474: --- ctakes does not have the capability to report pare

[jira] [Closed] (CTAKES-443) Stop rebuilding the typesystem for every module

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-443?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Sean Finan closed CTAKES-443. - Resolution: Fixed > Stop rebuilding the typesystem for every module > ---

[jira] [Closed] (CTAKES-188) GSoC: Create an interface for cTAKES

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-188?page=com.atlassian.jira.plugin.system.issuetabpanels:all-tabpanel ] Sean Finan closed CTAKES-188. - Resolution: Implemented This is covered by the piper files, piper gui, rest module, html writer and othe

[jira] [Commented] (CTAKES-512) Initialization of Annotator Class Failed

2018-12-25 Thread Sean Finan (JIRA)
[ https://issues.apache.org/jira/browse/CTAKES-512?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=16728771#comment-16728771 ] Sean Finan commented on CTAKES-512: --- I think that this xml descriptor attempts to use f