Re: [NMusers] Code lines for sequential runs through PsN

2016-03-30 Thread Paul Matthias Diderichsen
documentation. -- Paul Matthias Diderichsen, PhD Quantitative Solutions, a Certara company +31 624 330 706

Re: [NMusers] Incorporating standard deviation (SD) on fitted mean values

2015-11-19 Thread Paul Matthias Diderichsen
ters where the variability comes from. It's part of the data, with each reported outcome defined by c(mean,sd). sd incorporates both between- and within-subject variability. Separating BSV and WSV is tricky when only aggregate data is available. -- Paul Matthias Diderichsen, PhD Quantitative S

Re: [NMusers] Incorporating standard deviation (SD) on fitted mean values

2015-11-17 Thread Paul Matthias Diderichsen
within a > subjects (the measurement in each subject was performed one time), rather, it > is between subjects. The large SDs for some of the reported means is due to > the fact that BSV in gastric pH is high. > > Ahmad. > > -Original Message- > From: Paul Matthias

Re: [NMusers] RE: Welcome to nmusers

2015-09-23 Thread Paul Matthias Diderichsen
re stripped from posts to NMusers. (And since we're talking mailing list technicalities: it would be convenient to have a reply-to header added to posts so that replies automatically go back to the list) Have a nice day, -- Paul Matthias Diderichsen, PhD Quantitative Solutions B.V. +31 624 330 706

Re: [NMusers] forest plots in Xpose?

2015-09-17 Thread Paul Matthias Diderichsen
do plot with ggplot(): http://stackoverflow.com/questions/6916698/tornado-chart-diagram-with-ggplot2 -- Paul Matthias Diderichsen, PhD Quantitative Solutions B.V. +31 624 330 706

Re: [NMusers] Is “DOSE=0” accepted by NONMEM?

2015-09-08 Thread Paul Matthias Diderichsen
ords with TIME=0 and AMT=0. -- Paul Matthias Diderichsen, PhD Quantitative Solutions B.V. +31 624 330 706

Re: [NMusers] PsN 4.2.0 released

2014-05-29 Thread Paul Matthias Diderichsen
ault PsN. Is this correct? (xpost: nmusers@globomaxnm.com, psn-gene...@lists.sourceforge.net) Thanks in advance and kind regards, -- Paul Matthias Diderichsen, PhD Quantitative Solutions B.V. +31 624 330 706

[NMusers] Re: [Psn-general] SGE integration for psn/nonmem

2013-08-05 Thread Paul Matthias Diderichsen
intended for the use of the named recipient(s) only and > may contain confidential and / or privileged information. If you are not > the intended recipient, please contact the sender and delete this > message. Any unauthorised use of the information contained in this > message is prohibited. >

Re: [NMusers] Estimation method selection

2011-10-17 Thread Paul Matthias Diderichsen
reaching the boundary in case of FO. When I went to a training course in NONMEM 7, a prominent developer told us that "FO can F.O.". I found that quite amusing, and I believe that I have never used FO since... -- Paul Matthias Diderichsen, PhD Quantitative Solutions B.V. +31 624 330 706

Re: [NMusers] NM7.2 with MPI on 64bit linux and ifort 12

2011-05-31 Thread Paul Matthias Diderichsen
t see that as a big issue, just the documentation could be a little more detailed. I agree that as soon as you know what to do, it's just a minor inconvenience. ;-) Kind regards, -- Paul Matthias Diderichsen, PhD Quantitative Solutions B.V. +31 624 330 706

[NMusers] NM7.2 with MPI on 64bit linux and ifort 12

2011-05-30 Thread Paul Matthias Diderichsen
am only going to distribute threads on the local machine. Hence the gforker manager that doesn't need to be started up and configured explicitly. If there's a better/less messy way to make this configuration work, I'd be more than happy to learn! Kind regards, -- Paul Matthias D

Re: [NMusers] Question regarding Calculation Process in $DES BLOCK

2011-05-26 Thread Paul Matthias Diderichsen
27;t give you a good explanation for this design decision. Kind regards, -- Paul Matthias Diderichsen, PhD Quantitative Solutions B.V. +31 624 330 706

Re: [NMusers] Table formatting in NONMEM7- can I skip the "Table No." header row?

2011-05-18 Thread Paul Matthias Diderichsen
re "fill", which makes R accept non-rectangular data, and "as.is", which prevents R from converting character data to factors. Later, res.101 should probably be converted to numeric, but that's a different story... (maybe somebody knows a more elegant solution to

Re: [NMusers] Two sequential absorption processes

2011-04-12 Thread Paul Matthias Diderichsen
as Luann suggested by using two dose records; one for the zero-order and one for the first order absorption. Kind regards, -- Paul Matthias Diderichsen, PhD Quantitative Solutions B.V. +31 624 330 706

Re: [NMusers] RE: NONMEM/PsN benchmark for SGE expansion

2011-04-01 Thread Paul Matthias Diderichsen
but to my understanding, RAM and network bandwidth are less of a bottleneck on OGE than on MOSIX. (For that, MOSIX has other advantages...) Kind regards, -- Paul Matthias Diderichsen, PhD Quantitative Solutions B.V. +31 624 330 706

Re: [NMusers] Allrecords.txt

2011-03-31 Thread Paul Matthias Diderichsen
any frontend (wfn, psn, pdxpop) that you use. PS: A great source of information is the HTML help files in your nonmem installation (probably C:\nm712\html\index.htm or similar) Kind regards and good luck. -- Paul Matthias Diderichsen, PhD Quantitative Solutions B.V. +31 624 330 706

Re: [NMusers] NONMEM/PsN benchmark for SGE expansion

2011-03-28 Thread Paul Matthias Diderichsen
ters) Kind regards, -- Paul Matthias Diderichsen, PhD Quantitative Solutions B.V. +31 624 330 706