matplotlib on lion

I recently moved to a new machine running lion, and I am trying to get matplotlib up and running. I am receiving the following error: Error: Target org.macports.build returned: shell command failed (see log for details) Log for py27-matplotlib is at: /opt/local/var/macports/logs/_opt_local_var_ma

openmpi port and wrappers

Is there a way to automatically get the openmpi compilers to be linked as mpicc, mpic++, etc.? -gideon ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users

mpich2 and mpif77

When I install mpich2, the port doesn't provide mpif77 (or mpif90, etc.) Is this deliberate? -gideon ___ macports-users mailing list macports-users@lists.macosforge.org http://lists.macosforge.org/mailman/listinfo.cgi/macports-users

building SPRNG with macports gcc45 & mpich2

Slightly off topic, but I was wondering if anyone had successfully built SPRNG (http://sprng.cs.fsu.edu/) with a macports based gcc and mpich2. I have gcc45 and mpich+gcc45 installed, and I receive the error: Undefined symbols for architecture x86_64: "_main", referenced from: start in c

Re: building SPRNG with macports gcc45 & mpich2

n Schmidt wrote: > > On Dec 22, 2011, at 22:45, Gideon Simpson wrote: > >> Slightly off topic, but I was wondering if anyone had successfully built >> SPRNG (http://sprng.cs.fsu.edu/) with a macports based gcc and mpich2. >> >> I have gcc45 and mpich+gcc45 inst

py-scikits-bvp_solver on el capitan

Is there a way to change the gcc dependency of py-scikits-bvp_solver form gcc48 to something more recent? Since there’s a bug between gcc48 and el capitan, it won’t install. ___ macports-users mailing list macports-users@lists.macosforge.org https://l

matplotlib + ipython notebook crashing

I’m finding that when I use the OS X backend for matplotlib with ipython notebooks, the python application launcher crashes. Has anyone else had this problem? -gideon ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.ma

dolfin on el capitan

Since vtk5 seems to be broken on el capitan, dolfin won’t install. Is it possible to work around that? -gideon ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo/macports-users

Re: dolfin on el capitan

ere is an error similar to the one on ticket 49418 -gideon > On Feb 8, 2016, at 4:29 PM, Sean Farley wrote: > > > Gideon Simpson writes: > >> Since vtk5 seems to be broken on el capitan, dolfin won’t install. Is it >> possible to work around that? > > Is there

Re: dolfin on el capitan

The log file is 5 megs, should I open a new ticket and post it to the site? Or send it to the list serve? -gideon > On Feb 8, 2016, at 7:30 PM, Brandon Allbery wrote: > > > On Mon, Feb 8, 2016 at 7:27 PM, Gideon Simpson <mailto:gideon.simp...@gmail.com>> wrote: >

Re: dolfin on el capitan

When I run single process, it’s dying at the same point as in this ticket: https://trac.macports.org/ticket/49418 -gideon > On Feb 8, 2016, at 7:34 PM, Brandon Allbery wrote: > > > On Mon, Feb 8, 2016 at 7:31 PM, Gideon Simpson <mailto:gideon.simp...@gmail.com>> wrote

dolfin and vtk

dolfin appears to be broken on el capitan because it depends on vtk5, which has a built error in 10.11 (see https://trac.macports.org/ticket/49418). vtk 6, on the other hand, installs without a problem. is there a way to get dolfin to use the vtk that does work in place of the one that doesn’t

numpy/scipy and mkl

I have an intel mkl license, and I know that numpy/scipy can be built against it for a performance boost. I was wondering two things: 1. Is it possible that we could have a variant of numpy/scipy that supports mkl, or is that fundamentally at odds with macports, since the mkl is commercial? 2

atlas & numpy/scipy

I was curious about the possibility of parallelization of numperical linear algebra routines in numpy/scipy through ATLAS, but I'm getting an error when I try to install those variants. Has anyone gotten this to work? -- gideon ___ macports-users maili

64 bit linking error

I'm trying to compile something using the macports openmpi (built on macports gcc48), and am getting the following linking error: openmpicxx -I/Users/gideon/software/sprng4.4/include -o sprng_mpi sprng_mpi.cpp -L/Users/gideon/software/sprng4.4/lib -lsprng -I/opt/local/include/openmpi -L/opt/

Re: 64 bit linking error

This is 10.8, not mavericks. -gideon On Nov 26, 2013, at 7:42 PM, Ryan Schmidt wrote: > > On Nov 26, 2013, at 09:10, Gideon Simpson wrote: > >> I'm trying to compile something using the macports openmpi (built on >> macports gcc48), and am getting t

Re: dolfin issue

I don’t seem to have that file -gideon On Sep 29, 2014, at 8:00 PM, Ryan Schmidt wrote: > > On Sep 29, 2014, at 3:48 PM, Gideon Simpson wrote: > >> The following combination generated an error: >> sudo port install dolfin +mpich +petsc +slepc +suitesparse >> ---&g

Re: dolfin issue

Farley wrote: > > Ryan Schmidt writes: > >> On Sep 29, 2014, at 7:45 PM, Gideon Simpson wrote: >>> >>> I don’t seem to have that file >> >> Ok, looks like the compiler name is just being specified as >> "mpicc-mpich-mp", without a p

dolfin & petsc

I have macports petsc 3.5.2 installed, and i tried installing sudo port install dolfin +mpich +suitesparse +petsc +slepc. I got an error that looks like there was some break in the functionality of Petsc, at least with regard to dolfin: _opt_local_var_macports_sources_rsync.macports.org_relea

dolfin 1.5.0 and OS X 10.9

On one my machines I still have 10.9 installed and with the recent update to dolfin (which works fine on my 10.10 machine), I now get errors during the build: _opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_math_dolfin/dolfin/work/dolfin-1.5.0/build/dolfin/swig/modules

ipython 3.0 issue

I upgraded to ipython 3.0, and when I try to convert an ipython notebook to PDF or HTML, I get the error: ImportError: No module named mistune Is there a new dependency in ipython 3.0 that was not added to macports?___ macports-users mailing list macpo

Re: ipython 3.0 issue

py27-ipython @3.0.0_0+notebook+parallel+scientific Ok, installing mistune through pip solved the problem. Version 3.0 also requires py-jsonschema, which is not a current dependency. -gideon > On Mar 2, 2015, at 5:46 PM, Jeremy Lavergne > wrote: > > On Mon, March 2, 2015 1

ipython notebook problem

When I try launching ipython notebook, I get the error: ImportError: No module named functools32 IPython notebook format depends on the jsonschema package: https://pypi.python.org/pypi/jsonschema Please install it first. But port installed py-jsonschema The following p

Re: ipython notebook problem

@2.5.1_0 (active) -gideon > On Jun 15, 2015, at 3:05 PM, Lawrence Velázquez wrote: > > On Jun 15, 2015, at 3:01 PM, Gideon Simpson wrote: > >> When I try launching ipython notebook, I get the error: >> >> >> ImportError: No module named functools32 >> &g

Re: ipython notebook problem

t 3:07 PM, Brandon Allbery wrote: > >> On Mon, Jun 15, 2015 at 3:01 PM, Gideon Simpson >> wrote: >> >>> ImportError: No module named functools32 >>> >>>IPython notebook format depends on the jsonschema package: >> >> I think the botto

website problem

I’m trying to look up a port and I get an error when navigating to any of the trac.macports.org pages. -gideon ___ macports-users mailing list macports-users@lists.macosforge.org https://lists.macosforge.org/mailman/listinfo

Re: website problem

t; > >> On Aug 29, 2015, at 10:32 AM, Tim Johnson wrote: >> >> Same problem here (Alaska) >> Times out at >> apple-compu.edge1.sanjose2.level3.net >> (same as with macports.org earlier) >> from my server in Provo Utah, times out at >> 216.156.85

installing an older port

I tried following the directions online to download and install an older port, but I’m encountering the following problem: gideon@gs_air:ports$ svn checkout -r 137992 https://svn.macports.org/repository/macports/trunk/dports/devel/swig Error validating server certificate for 'https://svn.macport

Re: installing an older port

015 at 10:06 PM, Gideon Simpson <mailto:gideon.simp...@gmail.com>> wrote: > gideon@gs_air:swig$ sudo port install > Password: > Error: Unable to execute port: Could not open file: > /Users/gideon/Downloads/ports/swig/Portfile > > Make sure that the user "macports

Re: installing an older port

Got it, that works. One thing I can’t figure out how to do is to pull an older version of swig-python. I don’t see that as a separate port in the repository. -gideon > On Sep 4, 2015, at 10:26 PM, Ryan Schmidt wrote: > > > On Sep 4, 2015, at 9:06 PM, Gideon Simpson wrote: &

error with package

Got this recently when upgrading outdated packages: ---> Computing dependencies for glib2 ---> Fetching archive for glib2 ---> Attempting to fetch glib2-2.32.3_0.darwin_11.x86_64.tbz2 from http://packages.macports.org/glib2 ---> Attempting to fetch glib2-2.32.3_0.darwin_11.x86_64.tbz2.rmd160

Re: error with package

gt;gcc46 @4.6.3_2 Error: port uninstall failed: Please uninstall the ports that depend on cloog first. -gideon On May 18, 2012, at 6:28 PM, Lawrence Velázquez wrote: > On May 18, 2012, at 7:17 p.m., Gideon Simpson wrote: > >> ---> Computing dependencies for cloog >> --->

port problem upon update

I did an "update outdated", and the following happened: gideon@~$ sudo port upgrade outdated ---> liblzma is replaced by xz ---> Computing dependencies for xz ---> Fetching archive for xz ---> Attempting to fetch xz-5.0.4_0.darwin_11.x86_64.tbz2 from http://packages.macports.org/xz ---> Atte

Re: port problem upon update

++,objc,obj-c++,lto,fortran --libdir=/opt/local/lib/gcc46 --includedir=/opt/local/include/gcc46 --infodir=/opt/local/share/info --mandir=/opt/local/share/man --datarootdir=/opt/local/share/gcc-4.6 --with-local-prefix=/opt/local --with-libiconv-prefix=/opt/local --with-system-zlib --disable-nls --program-suffix=-mp-4.6 --with-gxx-inc

ghostscript problem

gideon@~$ sudo port install ghostscript ---> Computing dependencies for ghostscript ---> Verifying checksum(s) for ghostscript Error: Checksum (md5) mismatch for ghostscript-9.05.tar.gz Error: Checksum (sha1) mismatch for ghostscript-9.05.tar.gz Error: Checksum (rmd160) mismatch for ghostscript-9

Re: ghostscript problem

How do I determine that? -gideon On Jul 2, 2012, at 8:52 PM, Ryan Schmidt wrote: > > On Jul 2, 2012, at 20:43, Gideon Simpson wrote: > >> gideon@~$ sudo port install ghostscript >> ---> Computing dependencies for ghostscript >> ---> Verifying checksum(s) f

Re: ghostscript problem

rts/mpdistfiles/ghostscript/mappingresources4pdf_other_20091116.tar.Z http://svn.macports.org/repository/macports/distfiles/ghostscript/mappingresources4pdf_other_20091116.tar.Z -gideon On Jul 3, 2012, at 12:20 AM, Lawrence Velázquez wrote: > On Jul 2, 2012, at 11:45 p.m., Gideon Simpson wrote: >

Re: ghostscript problem

gideon@~$ cat /opt/local/var/macports/distfiles/ghostscript/ghostscript-9.05.tar.gz http://www.w3.org/TR/1999/REC-html401-19991224/strict.dtd";> -gideon On Jul 3, 2012, at 6:13 PM, Ryan Schmidt wrote: > cat /opt/local/var/macports/distfiles/ghostscript/ghostscript-9.05.tar.gz ___

Re: ghostscript problem

gideon@~$ sudo port install ghostscript ---> Computing dependencies for ghostscript ---> Fetching archive for ghostscript ---> Attempting to fetch ghostscript-9.05_2.darwin_11.x86_64.tbz2 from http://packages.macports.org/ghostscript ---> Fetching distfiles for ghostscript ---> Attempting to

Re: ghostscript problem

So I VPNed into my employer's network and had no trouble getting ghostscript through them, but there was an issue with my home (Comcast) internet. Very bizarre. -gideon On Jul 3, 2012, at 6:26 PM, Ryan Schmidt wrote: > > On Jul 3, 2012, at 18:14, Gideon Simpson wrote: > >

texi2html problem

I'm on Mountain Lion and did a port upgrade outdated. I am getting the following error: gideon@~$ sudo port clean --all texi2html ---> Cleaning texi2html gideon@~$ sudo port install texi2html ---> Computing dependencies for texi2html ---> Fetching archive for texi2html ---> Attempting to fet

slepc problem

I got the following error while trying to install slepc: version:1 :msg:main ---> Computing dependencies for slepc:info:main .:debug:main slepc has no conflicts :debug:main Searching for dependency: petsc :debug:main Didn't find receipt, going to depspec regex for: petsc :debug:main Changing to