Re: Import of bioconductor data packages.

2019-08-17 Thread Philippe Veber
It works just fine, thanks a lot Ricardo! Now I'm going to prepare a patch for the new packages I've inserted in bioconductor. Le ven. 16 août 2019 à 15:10, Ricardo Wurmus a écrit : > > Ricardo Wurmus writes: > > > When Bioconductor retired their SVN repository we switched to > > downloading th

Re: Import of bioconductor data packages.

2019-08-16 Thread Ricardo Wurmus
Ricardo Wurmus writes: > When Bioconductor retired their SVN repository we switched to > downloading the target tarball and extracting the DESCRIPTION file from > there. We aren’t doing this for experiment or data packages yet, but I > think we can easily fix this now. > > I’ll give this a sho

Re: Import of bioconductor data packages.

2019-08-15 Thread Ricardo Wurmus
Hi Philippe, > I am trying to import a bioconductor package that depends on a bioconductor > data package. While the command for the software package works fine : > > guix import cran --archive=bioconductor ChIPQC > > the one for the data package doesn't : > > $ guix import cran --archive=biocon

Import of bioconductor data packages.

2019-08-15 Thread Philippe Veber
Hi all, I am trying to import a bioconductor package that depends on a bioconductor data package. While the command for the software package works fine : guix import cran --archive=bioconductor ChIPQC the one for the data package doesn't : $ guix import cran --archive=bioconductor TxDb.Celegans