Re: [PATCH] Clean up 'THANKS' and 'AUTHORS'.

2015-07-01 Thread Alex Kost
After gathering some information about people, I updated this patch (attached) to fix some names and emails. I'm going to wait for a couple of days before pushing it to let people check this info. >From 0d0b74ec009dee0147a2bca2b314e9294e69c897 Mon Sep 17 00:00:00 2001 From: Alex Kost Date: Sat,

[PATCH] Add '.mailmap'.

2015-07-01 Thread Alex Kost
Thanks to all for answering! As may be checked with: git shortlog --email | grep -e '^[^ ]' after applying the attached patch there will be a unique entry for each contributor. So now "git log" may be used to generate an AUTHORS file. >From ac0d941b2b098e31c549b9e4269e2a31547287bb Mon Sep 17

Re: [PATCH] gnu: make-bootstrap: Produce the correct %glibc-bootstrap-tarball for Hurd systems.

2015-07-01 Thread Manolis Ragkousis
Καλησπέρα :-) Updated patch according to your suggestions. Your solution is much more elegant. I added you as a co-author, I hope you don't have a problem with that. :-) Manolis From e93fe7ae5b22245d41814e079279a8e893781287 Mon Sep 17 00:00:00 2001 From: Manolis Ragkousis Date: Tue, 30 Jun 2015

Re: [PATCH] guix environment: return the return value of the executed command.

2015-07-01 Thread Thompson, David
For the patch title, change to: "scripts: environment: Return the exit status of the command." On Wed, Jul 1, 2015 at 5:03 PM, Cyril Roelandt wrote: > * gnu/scripts/environment.scm (guix-environment): return the return value of > (system command). Rather: * guix/scripts/environment.scm (g

[PATCH] guix environment: return the return value of the executed command.

2015-07-01 Thread Cyril Roelandt
* gnu/scripts/environment.scm (guix-environment): return the return value of (system command). --- guix/scripts/environment.scm | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/guix/scripts/environment.scm b/guix/scripts/environment.scm index 007fde1..95474e7 100644 --- a/guix

Re: [PATCH 5/5] gnu: Add emacs-mmm-mode

2015-07-01 Thread Federico Beffa
On Wed, Jul 1, 2015 at 7:49 PM, Alex Kost wrote: > I think I've found a problem with downloading packages from melpa-stable > (probably the same will be with 'melpa', but I don't know). I tried to > build this 'emacs-mmm-mode' package but it failed because >

Re: How to handle required plugins and dbus services for GNOME Programs?

2015-07-01 Thread Federico Beffa
On Tue, Jun 30, 2015 at 9:28 PM, Ludovic Courtès wrote: > Federico Beffa skribis: > >> Adding 'dconf' and 'libcanberra' as default inputs to >> 'glib-or-gtk-build-system' would make many of these problems go away, >> with the only drawback of a possibly unused entry in an environment >> variable.

Re: [PATCH 5/5] gnu: Add emacs-mmm-mode

2015-07-01 Thread Alex Kost
I think I've found a problem with downloading packages from melpa-stable (probably the same will be with 'melpa', but I don't know). I tried to build this 'emacs-mmm-mode' package but it failed because does not exist anymore (because the curren

Re: guix environment & PS1

2015-07-01 Thread 韋嘉誠
On Jul 1, 2015 4:02 PM, "Thompson, David" wrote: > On Wed, Jul 1, 2015 at 9:10 AM, Ludovic Courtès wrote: > > I reckon it has the unfortunate property of not working out of the box > > (except on GuixSD.) I’m sure many tools these days would choose to > > hard-code a fancy colored PS1; while I

Re: [PATCH] Add skalibs, execline.

2015-07-01 Thread 韋嘉誠
On Jul 1, 2015 3:32 PM, "Ludovic Courtès" wrote: > > I'm working on s6, and it > > expects -lexecline to work. Currently I'm feeding its configure > > "--with-lib=.../lib/execline", would be nice to get that done in > > execline instead. Modifying LIBRARY_PATH has no effect, what do I need > > to

Re: [PATCH] Add preseq.

2015-07-01 Thread Ludovic Courtès
Ricardo Wurmus skribis: > Ludovic Courtès writes: > >>> + (snippet >>> + ;; Remove bundled samtools. Leave the headers. >>> + '(for-each delete-file >>> + (find-files "preseq-master/samtools" >>> +

Re: 0.8.3 for mid-July?

2015-07-01 Thread Ludovic Courtès
"Thompson, David" skribis: > On Wed, Jul 1, 2015 at 9:27 AM, Ludovic Courtès wrote: >> Hello! >> >> I think we should release 0.8.3 for mid to end July. > > That sounds good. I guess now is a good time to mention that I will > be AFK from July 10th to the 17th. Noted. I’ll be mostly AFK after

Re: Help with a basic GuixSD installation

2015-07-01 Thread Daniel Pimentel
On 2015-06-30 23:04, Evan Rowley wrote: Thanks Daniel and Ludovic for the helpful information. I will try to install again over the coming days and report my progress. On Tue, Jun 30, 2015 at 1:06 PM, Claes Wallin (韋嘉誠) wrote: On 30-Jun-2015 3:08 pm, "Ludovic Courtès" wrote: Evan Rowley skr

Re: guix environment & PS1

2015-07-01 Thread Thompson, David
On Wed, Jul 1, 2015 at 9:10 AM, Ludovic Courtès wrote: > "Thompson, David" skribis: > >> On Thu, Jun 25, 2015 at 7:45 AM, Ludovic Courtès wrote: >>> Cyril Roelandt skribis: >>> +(define (run-shell shell env-name) + "Run the given SHELL, adding '(ENV-NAME) ' at the start of the prompt

Re: Generate 'AUTHORS'

2015-07-01 Thread Ludovic Courtès
Alex Kost skribis: > - Cyprien Nicolas: Nicolas is a name, right? So I think the preferable > form would be "Nicolas Cyprien", no? Should be “Cyprien Nicolas” (Cyprien is the first name.) Ludo’.

Re: 0.8.3 for mid-July?

2015-07-01 Thread Thompson, David
On Wed, Jul 1, 2015 at 9:27 AM, Ludovic Courtès wrote: > Hello! > > I think we should release 0.8.3 for mid to end July. That sounds good. I guess now is a good time to mention that I will be AFK from July 10th to the 17th. > The relevant things to be done include: > > • Merging wip-diet and

Re: [PATCH] Add Hydrogen.

2015-07-01 Thread Ludovic Courtès
Ricardo Wurmus skribis: > From 795a43bf73a3a3417e095a5f88c48603e2a67ad7 Mon Sep 17 00:00:00 2001 > From: Ricardo Wurmus > Date: Mon, 29 Jun 2015 18:26:43 +0200 > Subject: [PATCH] gnu: Add Hydrogen. > > * gnu/packages/music.scm (hydrogen): New variable. LGTM, thanks. Ludo’.

Re: [PATCH] Add preseq.

2015-07-01 Thread Ricardo Wurmus
Ludovic Courtès writes: >> + (snippet >> + ;; Remove bundled samtools. Leave the headers. >> + '(for-each delete-file >> + (find-files "preseq-master/samtools" >> + "\\.c$") > > Why leave

Re: [PATCH] Add WarpedLMM.

2015-07-01 Thread Ludovic Courtès
Ricardo Wurmus skribis: > From 0362c7d01134a46530f9fe01a477c28fd3ae15ff Mon Sep 17 00:00:00 2001 > From: Ricardo Wurmus > Date: Wed, 17 Jun 2015 12:22:19 +0200 > Subject: [PATCH] gnu: Add WarpedLMM. > > * gnu/packages/bioinformatics.scm (python2-warpedlmm): New variable. LGTM, thanks! Ludo’.

Re: [PATCH] Add skalibs, execline.

2015-07-01 Thread Ludovic Courtès
"Claes Wallin (韋嘉誠)" skribis: > On Jun 28, 2015 10:38 PM, "Ludovic Courtès" wrote: >> "Claes Wallin (韋嘉誠)" skribis: > >> > +(search-paths >> > + (list (search-path-specification >> > +(variable "CPATH") >> > +(files '("include"))) >> > + (search-path-sp

Re: [PATCH] Add preseq.

2015-07-01 Thread Ricardo Wurmus
> Attached is a new version that includes support for BAM files, but > without using the bundled version of samtools. Two patches were > necessary that I have submitted upstream. > > I'm still testing this with a user, and I'm waiting for upstream to > comment on the patches, so I'm not in a hurry

Re: [PATCH] Add preseq.

2015-07-01 Thread Ludovic Courtès
Ricardo Wurmus skribis: > From 3ffe6847848f6ba107e0757728f1c6a6e7807d56 Mon Sep 17 00:00:00 2001 > From: Ricardo Wurmus > Date: Tue, 23 Jun 2015 10:54:00 +0200 > Subject: [PATCH] gnu: Add preseq. > > * gnu/packages/bioinformatics.scm (preseq): New variable. [...] > + (snippet > +

0.8.3 for mid-July?

2015-07-01 Thread Ludovic Courtès
Hello! I think we should release 0.8.3 for mid to end July. The relevant things to be done include: • Merging wip-diet and wip-environment, and maybe wip-container, though that one could just as well be merged afterwards. • We must sit down and fix as many bugs as possible.

Guix in HPC paper accepted for RepPar

2015-07-01 Thread Ludovic Courtès
Hello, FYI, Ricardo and I, with the help of other people, submitted a paper on why we think Guix can be beneficial in a high-performance computing (HPC) context: http://savannah.gnu.org/forum/forum.php?forum_id=8307 The paper was accepted so we’ll be presenting it in Vienna, Austria, end of Au

Re: guix environment & PS1

2015-07-01 Thread Ludovic Courtès
"Thompson, David" skribis: > On Thu, Jun 25, 2015 at 7:45 AM, Ludovic Courtès wrote: >> Cyril Roelandt skribis: >> >>> +(define (run-shell shell env-name) >>> + "Run the given SHELL, adding '(ENV-NAME) ' at the start of the prompt." >>> + (cond ((string=? shell "/bin/bash") >>> + (let

Re: Help with a basic GuixSD installation

2015-07-01 Thread 韋嘉誠
On Wed, Jul 1, 2015 at 11:23 AM, Ludovic Courtès wrote: > "Claes Wallin (韋嘉誠)" skribis: > >> So *that's* what the mysterious (title 'label) means! > > It’s not that mysterious: > > https://www.gnu.org/software/guix/manual/html_node/File-Systems.html > > :-) Ow, the burn. :-)

Re: [PATCH] r: make and install info files

2015-07-01 Thread m8r-y0v7u9
Thanks for the review and comments. Below is a revised patch. It seemed to work ok here. * gnu/packages/statistics.scm (r)[arguments]: make and install info files diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index 91d988e..35355f7 100644 --- a/gnu/packages/sta

Re: Help with a basic GuixSD installation

2015-07-01 Thread Ludovic Courtès
"Claes Wallin (韋嘉誠)" skribis: > So *that's* what the mysterious (title 'label) means! It’s not that mysterious: https://www.gnu.org/software/guix/manual/html_node/File-Systems.html :-) Ludo’.

Re: Generate 'AUTHORS'

2015-07-01 Thread Ben Woodcroft
On 01/07/15 05:26, Alex Kost wrote: - Ben: or ? b.woodcr...@uq.edu.au please.