[gmx-users] Increase in kinetic energy in LINCS with smaller time step

2013-07-05 Thread Nakamura, Hideya
Dear Gromacs users, I have a question about an effect of time-step on results of simulation with LINCS. Now, I am running on a MD simulation of a rigid molecule in vacuum under NVE ensemble. No temperature coupling was used. No inter-atomic potential was used. The rigid molecule is consisting of

[gmx-users] Increase in kinetic energy in LINCS with smaller time step

2013-07-05 Thread Nakamura, Hideya
Dear Gromacs users, I have a question about an effect of time-step on results of simulation with LINCS. Now, I am running on a MD simulation of a rigid molecule in vacuum under NVE ensemble. No temperature coupling was used. No inter-atomic potential was used. The rigid molecule is consisting of