Re: [gmx-users] justin-lipid tutorial........

2012-05-08 Thread Justin A. Lemkul
On 5/8/12 8:06 AM, rama david wrote: Hi gromac friends I am performing the justin tutorials on lipids http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/gmx-tutorials I am strugling now on 3rd steps I have following queris regarding to steps ... 1. I increase the van der walls radii of

Re: [gmx-users] Justin-lipid tutorial..

2012-05-05 Thread Justin A. Lemkul
On 5/5/12 4:01 AM, rama david wrote: Hi Gromacs Friends, I am doing the justin-lipid tutorial..Link to the tutorial is ... http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/gmx-tutorials/index.html I made the g96_53a6_lipid force field as per the instruction of tutorial.. I have some

Re: [gmx-users] Justin-lipid tutorial...

2012-05-05 Thread Justin A. Lemkul
On 5/5/12 2:50 AM, rama david wrote: Hi Gromacs friends, I completed the justin lipid tutorials upto the three steps ... While performing the tutorial of lipid written by justin , I get following query.. 1. As per the tutorials we added the DPPC chain topology *; Include DPPC chain top