Dear Nizamov,
Thanks for this reply, now it makes more sense.
Best,
Nadir
-Original Message-
From: Nizamov Shawkat <[EMAIL PROTECTED]>
To: Discussion list for GROMACS users
Date: Mon, 16 Jun 2008 09:56:22 +0500
Subject: Re: [gmx-users] basic units: acceleration conflict (re
Let me summarize the conflict in this example:
The acceleration to be applied corresponds to 2x10^12 meter/(second squared)
(in words: two times ten to twelve) which means in vacuum that water molecule
may gain two times ten to twelve meter/second velocity at every second (e.g.
for dilute cas
water molecule which goes with a velocity of two kilometer per second?
>
> Such results are everywhere (also in journals) ...
>
> I still hope that I underestimate something or don't take an important point
> into account. Please help...
>
> Best,
> Nadir
>
> -O
portant point
into account. Please help...
Best,
Nadir
-Original Message-
From: David van der Spoel <[EMAIL PROTECTED]>
To: Discussion list for GROMACS users
Date: Sat, 14 Jun 2008 16:13:03 +0200
Subject: Re: [gmx-users] basic units: acceleration conflict (revision)
CIHAN NADIR
CIHAN NADIR KAPLAN wrote:
There has been some typos.
I mean, such an acceleration would result in unphysical velocities since the relativistic effects are not accounted.
The passage in question should be as follows:
"When one wants to accelerate a group, he should include it in the *.mdp file
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